openmolecules.org

 
Home » DataWarrior » Cheminformatics » retrosyntheis tools
Re: retrosyntheis tools [message #1416 is a reply to message #1407] Thu, 23 September 2021 21:10 Go to previous messageGo to previous message
nbehrnd is currently offline  nbehrnd
Messages: 211
Registered: June 2019
Senior Member
If your organization supports an account on spaya.ai, then a right-click on the structure of interest offers access to suggestions. You have 30 days to venture out and get familiar enough with this service to come to a decision to purchase their service, or not.

They are not the only ones in the field to predict reactions/to offer retrosynthesis (e.g, https://rxn.res.ibm.com/, or https://askcos.mit.edu/retro/); you may enter the targeted structure by the SMILES string DataWarrior can assign to the molecule structures. If you have access to and some familiarity with Python, AiZynthFinder by the Reymond group may be an interesting example (open source code, permissive MIT licence), too.

[1a] Genheden, S., Thakkar, A., Chadimová, V. et al. AiZynthFinder: a fast, robust and flexible open-source software for retrosynthetic planning. J Cheminform 12, 70 (2020) (https://doi.org/10.1186/s13321-020-00472-1)
[1b] Retrosynthetic accessibility score (RAscore) – rapid machine learned synthesizability classification from AI driven retrosynthetic planning, Thakkar et al. Chem. Sci., 2021,12, 3339-3349 (https://doi.org/10.1039/D0SC05401A)
 
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Previous Topic: Importing compounds with assay data from Pubchem into Datawarrior
Next Topic: Assessing A Machine Learning Method's Predictivity
Goto Forum:
  


Current Time: Sat May 04 22:37:43 CEST 2024

Total time taken to generate the page: 0.03628 seconds