openmolecules.org

 
Home » DataWarrior » Bug Reports » Incomplete SMILES related to double bonds
Re: Incomplete SMILES related to double bonds [message #285 is a reply to message #281] Sun, 04 June 2017 13:39 Go to previous messageGo to previous message
Christoph is currently offline  Christoph
Messages: 9
Registered: May 2017
Junior Member
Hi Thomas,

Thank you very much for your answer and looking into this issue.

Saving the structures in DataWarrior in the SDF-format (2D) does preserve the stereocenters, is this correct? Then a workaround in the meantime until DataWarrior is updated would be to save the compounds as SDF-File and then convert it with obabel to obtain isomeric SMILES.

Best wishes,
Christoph

[Updated on: Sun, 04 June 2017 13:39]

Report message to a moderator

 
Read Message
Read Message
Read Message
Read Message
Previous Topic: Name2Structure-Piperylene
Next Topic: Substructure search and stereochemistry
Goto Forum:
  


Current Time: Fri Nov 22 15:55:49 CET 2024

Total time taken to generate the page: 0.04059 seconds