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Re: Why is clustering limited up to 10000 molecules? [message #158 is a reply to message #157]

Thu, 03 March 2016 21:54

avkitex
Messages: 2
Registered: February 2016

Junior Member

Dear, Thomas

I have servers with about 30Gb ram and a lot of time. And I woult like to try doing it.
Can you tell me how to patch and recompile jar file? And what is the best way to run it in console mode? (I have molecules in sdf or mol2 format. I would like to have a clusterisation tree in newick or compatable format.)

Looking forward to hear from you.

Best,
Nikita

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[Message index]

		Why is clustering limited up to 10000 molecules? By: Nastasia on Wed, 22 July 2015 16:37
		Re: Why is clustering limited up to 10000 molecules? By: thomas on Thu, 23 July 2015 21:40
		Re: Why is clustering limited up to 10000 molecules? By: avkitex on Sun, 28 February 2016 19:03
		Re: Why is clustering limited up to 10000 molecules? By: thomas on Thu, 03 March 2016 21:49
		Re: Why is clustering limited up to 10000 molecules? By: avkitex on Thu, 03 March 2016 21:54
		Re: Why is clustering limited up to 10000 molecules? By: thomas on Fri, 04 March 2016 22:24
		Re: Why is clustering limited up to 10000 molecules? By: dataviz on Wed, 22 March 2017 11:34
		Re: Why is clustering limited up to 10000 molecules? By: thomas on Thu, 30 March 2017 20:35
		Re: Why is clustering limited up to 10000 molecules? By: E3ubiquitinligase on Thu, 10 January 2019 21:46
		Re: Why is clustering limited up to 10000 molecules? By: thomas on Fri, 11 January 2019 00:00
		Re: Why is clustering limited up to 10000 molecules? By: E3ubiquitinligase on Fri, 11 January 2019 07:21

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