openmolecules.org Forum: Functionality » Remove 'abs' and other chiral center labels in structure depiction

Home » DataWarrior » Functionality » Remove 'abs' and other chiral center labels in structure depiction (chiral labels are mandatory in structure depiction )

Show: Today's Messages :: Polls :: Message Navigator

Remove 'abs' and other chiral center labels in structure depiction [message #818]

Mon, 16 March 2020 16:26

zhentg
Messages: 25
Registered: March 2020

Junior Member

chiral labels are mandatory in structure depiction(pls check the attached image), it is helpful, but if I want to present the structures in a slide or manuscript, I want to remove these labels to keep the structure depiction simple and clear.

How to remove the chiral labels.
index.php?t=getfile&id=161&private=0

Attachment: 批注 2020-03-16 232539.png
(Size: 13.10KB, Downloaded 751 times)

Datawarrior is a good tool

[Updated on: Wed, 25 March 2020 09:51]

Report message to a moderator

Re: Remove 'abs' and other chiral center labels in structure depiction [message #833 is a reply to message #818]

Wed, 25 March 2020 09:52

zhentg
Messages: 25
Registered: March 2020

Junior Member

It would be nice if there is an option to switch on/off the 'abs' label display.

Datawarrior is a good tool

Report message to a moderator

Re: Remove 'abs' and other chiral center labels in structure depiction [message #1002 is a reply to message #833]

Sun, 12 July 2020 21:08

thomas
Messages: 715
Registered: June 2014

Senior Member

For the structure view there are now flexible structure display modes concerning and stereo labels and usage of color. With this structure images should be more appropriate for presentation, papers or patents.

This change is available in the current development version.

Report message to a moderator

Re: Remove 'abs' and other chiral center labels in structure depiction [message #1064 is a reply to message #1002]

Wed, 09 September 2020 02:24

zhentg
Messages: 25
Registered: March 2020

Junior Member

Thanks for the added option.
I can turn off the stereo labels in "Structure View" panel now through the "Set Structure Stereo Display Mode" option.
Am I using the function correctly?
index.php?t=getfile&id=262&private=0

Attachment: dw.png
(Size: 94.04KB, Downloaded 667 times)

Datawarrior is a good tool

[Updated on: Wed, 09 September 2020 02:25]

Report message to a moderator

Re: Remove 'abs' and other chiral center labels in structure depiction [message #1071 is a reply to message #1064]

Sun, 13 September 2020 12:13

thomas
Messages: 715
Registered: June 2014

Senior Member

Looks OK to me. One should be aware that in case of multiple stereo centers informarmation may be lost, e.g. in case of epimers. The 'stereo display mode' can be combined with the 'color display mode' as patent layers seem to prefer black & white structures with no stereo labels.

Report message to a moderator

Previous Topic:	Enumerating a virtual library
Next Topic:	Managing Columns

Goto Forum:

-=] Back to Top [=-

[ Syndicate this forum (XML) ] [

] [

]

Current Time: Sat Nov 23 16:02:52 CET 2024

Total time taken to generate the page: 0.03858 seconds